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Here's a repository of some papers our users researched or just found interesting. Please share your research.

2008-04-01

Mediator and C/EBP-â

RAPTOR   

Shreeram C. Nallar

Hui Li$, Padmaja Gade$, Shreeram C. Nallar, Abhijit Raha, Sanjit K. Roy, Sreenivasu Karra, Janardan K. Reddy¶, Sekhar P. Reddy¶¶ and Dhananjaya V. Kalvakolanu*. Department of Microbiology & Immunology, Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD 21201. ¶Department of Pathology, Northwestern University School of Medicine, Chicago, IL. ¶¶Department of Environmental Health Sciences, The Johns Hopkins University School of Public Health, Baltimore, MD 21205.

The Med1 subunit of transcriptional mediator plays a central role in regulating C/EBP-beta driven transcription in response to Interferon-gamma. RAPTOR was used for domain confirmation and accurate identification of the critical region of ceullular factor of C/EBP.

2005-10-21

3D structure of vitronectin

PROSPECT   

J.R.

Xu et Al, Model for the three-dimensional structure of vitronectin: Predictions for the multi-domain protein from threading and docking, Proteins: Structure, Function, and Genetics Volume 44, Issue 3 , Pages 312 - 320

"The structure of vitronectin, an adhesive protein that circulates in high concentrations in human plasma, was predicted through a combination of computational methods and experimental approaches."

2005-10-21

Thermal adaptation in Antartic Archea

PROSPECT   

James

Saunders, N.F.W., et. Al, Mechanisms of Thermal Adaptation Revealed From the Genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii, Genome Research 13:1580-1588, 2003

"To identify potential cold shock domain (CSD-like) folds in proteins, all putative ORFs from M. frigidum and M. burtonii were threaded against a nonredundant set of CSDs from SCOP using global alignment."

2005-09-29

The first posting

RAPTOR   

Iain

This is the first posting. I hope there will be many more.

When I was searching on the web yesterday, I found a lot of great papers. I hope you'll share yours here. We've got a lot of traffic comming through our website, so you're papers will get a lot of publicity. So post, or post someone else's paper that you found interesting.