Blank-Landeshammer, B., et al. Combination of Proteogenomics with Peptide De Novo Sequencing Identifies New Genes and Hidden Posttranscriptional Modifications, Volume 10,...
Cathepsin G Degrades Synovial Fluid Lubricin: Relevance For Osteoarthritis Pathogenesis
Huang, S., et al. Cathepsin G Degrades Synovial Fluid Lubricin: Relevance For Osteoarthritis Pathogenesis, bioRxiv, 10.1101/792184 Lubricin (PRG4) is a mucin type protein...
Mass spectrometry of peptides and proteins using digestion by a grape cysteine protease at pH 3
Perutka, Z., et al. Mass spectrometry of peptides and proteins using digestion by a grape cysteine protease at pH 3, 10.1002/jms.4444 Cysteine...
Proteomics pipeline for identifying variant proteins in Plasmodium falciparum parasites isolated from children presenting with malaria
Gonzales Hurtado, P., et al. Proteomics pipeline for identifying variant proteins in Plasmodium falciparum parasites isolated from children presenting with malaria 10.1021/acs.jproteome.9b00169...
ProteoClade: a taxonomic toolkit for multi-species and metaproteomic analysis
Mooradian, A., et al. ProteoClade: a taxonomic toolkit for multi-species and metaproteomic analysis, 10.1101/793455 We present ProteoClade, a Python toolkit that performs...
MHCquant: Automated and reproducible data analysis for immunopeptidomics
Bichmann, L., et al. MHCquant: Automated and reproducible data analysis for immunopeptidomics. Personalized multipeptide vaccines are currently being discussed intensively for...
Secretome of the carcinogenic helminth Spirocerca lupi reveals specific parasite proteins associated with its different life stages
Rojas, A., et al. Secretome of the carcinogenic helminth Spirocerca lupi reveals specific parasite proteins associated with its different life stages 10.1101/793455...
Application of mass spectrometry-based MHC immunopeptidome profiling in neoantigen identification for tumor immunotherapy
Zhang, X., et al. Application of mass spectrometry-based MHC immunopeptidome profiling in neoantigen identification for tumor immunotherapy 140, 109542 One of...
Human serum albumin presents isoform variants with altered neonatal Fc Receptor interactions
Leblanc, Y., et al. Human serum albumin presents isoform variants with altered neonatal Fc Receptor interactions 28(11) 1982-1992 Human serum albumin...
Exploring toxin evolution: venom protein transcript sequencing and transcriptome-guided high-throughput proteomics
Modahl, C., et al. Exploring toxin evolution: venom protein transcript sequencing and transcriptome-guided high-throughput proteomics. 97-127 Studying animal toxin evolution requires...