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Mis-splicing-derived neoantigens and cognate TCRsin splicing factor mutant leukemias

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On 2025-05-012025-05-12By Bioinformatics Solutions IncIn Featured User Publications

Effective immunotherapy for acute myeloid leukemia (AML) currently relies primarily on neoantigens derived from somatic mutations. However, these can sometimes...

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Translation dysregulation in cancer as a source for targetable antigens

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On 2025-04-152025-04-15By Bioinformatics Solutions IncIn Featured User Publications

Exploring Mistranslation as a Source of Neoantigens in Cancer Immunotherapy The importance of neoantigens in cancer immunotherapies has been underscored...

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Maximizing Immunopeptidomics-Based Bacterial Epitope Discovery by Multiple Search Engines and Rescoring

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On 2025-04-152025-04-15By Bioinformatics Solutions IncIn Featured User Publications

Unlocking Bacterial Epitope Discovery: How Rescoring and PEAKS Deep Learning Boost Immunopeptidomics Antimicrobial resistance is a serious and growing global...

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Precise mycobacterial species and subspecies identification using the PEP-TORCH peptidome algorithm

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On 2025-03-072025-04-10By Bioinformatics Solutions IncIn Featured User Publications

Mycobacterial infections remain a major global health concern, requiring fast and accurate identification for effective treatment.

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HLA I immunopeptidome of synthetic long peptide pulsed human dendritic cells for therapeutic vaccine design

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On 2025-02-272025-04-10By Bioinformatics Solutions IncIn Featured User Publications

Synthetic long peptides (SLPs) are a promising candidate for therapeutic vaccine due to its characteristics. To design an effective SLP-based vaccine, knowing the presented immunopeptidome after the vaccine is very important.

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Impact of Bioinformatics Search Parameters for Peptides’ Identification and Their Post-Translational Modifications: A Case Study of Proteolysed Gelatines from Beef, Pork, and Fish

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On 2024-02-222024-02-22By Bioinformatics Solutions IncIn Featured User Publications

Learn how PEAKS is being used in agrifood studies for peptide and PTM identification.

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Comprehensive characterization and detection of nut allergens in bakery foods using Q-TOF mass spectrometry and bioinformatics

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On 2024-02-072024-02-07By Bioinformatics Solutions IncIn Featured User Publications

Learn how mass spectrometry shows promise, allowing precise allergen detection.

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TOF IMS mass spectrometry-based immunopeptidomics refines tumor antigen identification

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On 2023-12-202023-12-20By Bioinformatics Solutions IncIn Featured User Publications

Learn how immunotherapy relies on tumour antigens to stimulate anti-tumour T cell responses, and emphasises the need to identify exclusive tumour surface antigens.

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Proteomic and toxicological characterization of the venoms of the most enigmatic group of rattlesnakes: The long-tailed rattlesnakes

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On 2023-12-062023-12-06By Bioinformatics Solutions IncIn Featured User Publications

Learn how this study further our understanding of rattlesnake venom evolutionary and how this can aid in development of effective antivenoms.

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Some structural features of the peptide profile of myelin basic protein-hydrolyzing antibodies in schizophrenic patients

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On 2023-11-292023-12-06By Bioinformatics Solutions IncIn Featured User Publications

Learn how this study sheds light on the mechanism behind IgG's catalytic nature in acute schizophrenia cases.

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