PEAKS Online 11 Release (Patch Version)

Today, Bioinformatics Solutions Inc. (BSI) is proud to release a new version of PEAKS Online that offers a robust, high-throughput, multi-user solution. This PEAKS Online release uses the latest technology to increase data analysis speed for large-cohort studies and harnesses deep learning for DDA and DIA workflows to offer a solution that is both, sensitive and extremely accurate

This new version of PEAKS Online features an enhanced DDA- and DIA-LFQ workflows with an automated QC tool for protein/peptide identification and quantification workflows. New to PEAKS Online, users can find deep learning enabled DeepNovo Sequencing, NEW PEAKS PTM: Optimised algorithms for a confident PTM identification at sequence and site level, enhanced PTM analysis solution in DIA workflow, and DIA data support in our DeepNovo Peptidome for immunopeptidomics.

For all users with an active Service Plan Subscription, we encourage you to upgrade to the latest version and accelerate discovery with the latest features and workflows in PEAKS Online 11. If you are new to PEAKS or using an older version, please feel free to request a free trial or pricing.


  • NEW DeepNovo – deep learning-based solution with higher accuracy and throughput
  • NEW PEAKS PTM: signature ions enabled higher sensitivity and confident PTM profiling
  • DeepNovo Peptidome: Comprehensive peptidome workflow for DDA and DIA data, that integrates database search and de novo sequencing with FDR control
  • Enhanced Automated QC tool for protein identification and quantification workflows with DDA and DIA
  • Support universal modification in DIA analysis
  • Support DIA data from Orbitrap Astral